EGAF00004918908 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918908
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7070068
Sequences flagged as poor quality	0
Sequence length	150
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19826	0.28042163102250217	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT	15444	0.21844202912899846	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14926	0.2111153669243351	No Hit
ATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	11556	0.16344963018743242	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATATAG	11223	0.1587396330558631	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9692	0.13708496155906844	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATAT	9220	0.13040892958879605	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	9105	0.12878235400281865	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCAACG	11810	64.13431	3
TCAACGC	11975	63.37087	4
CAACGCA	12350	62.322453	5
GTATCAA	12545	61.71139	1
AACGCAG	12775	60.13638	6
CGCAGAG	13080	58.455994	8
ACGCAGA	13345	57.348743	7
GGTATCA	5115	50.403862	1
GCAGAGT	15860	47.346767	9
TATCAAC	18525	41.433167	2
GTCTCGC	1025	37.341625	1
TCTGTCG	1705	35.470486	8
ACGGGAC	1400	31.370855	3
GAGTACG	9980	30.1026	1
CGCTCTG	1260	28.571512	5
GTACGGG	12250	28.415295	1
AGTACGG	10750	28.26527	2
CTCGCTC	1370	27.853504	3
TACGGGA	5640	27.44786	2
GGGGTTA	9775	26.29573	6