EGAF00004918926 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918926
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	991245
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4780	0.4822218523170356	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	1689	0.1703917800341994	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	1537	0.1550575286634485	No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAG	1213	0.12237136126790048	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	1206	0.1216651786389843	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	1178	0.11884044812331966	No Hit
GTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC	1048	0.10572562787201953	No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTA	1031	0.10401061291608028	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGT	1021	0.10300178058905719	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	1003	0.10118588240041564	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3540	0.0	57.77301	1
GGTATCA	2090	0.0	54.047688	1
ATCAACG	4620	0.0	44.014698	3
CAACGCA	4730	0.0	42.8654	5
TCAACGC	4895	0.0	41.66343	4
TATCAAC	4985	0.0	41.14771	2
AACGCAG	5065	0.0	40.499836	6
GTACTGG	665	0.0	40.230988	1
CGCAGAG	5940	0.0	34.03861	8
CTTGTAT	70	0.0027990593	33.974545	2
ACGCAGA	5940	0.0	33.93507	7
GCAGAGT	6000	0.0	33.701626	9
GGTTCAC	845	0.0	33.071568	6
AGATACG	45	2.4016708E-4	33.036644	58-59
GTTCACT	905	0.0	30.880533	7
GCCGTGC	40	0.005341114	29.775042	88-89
CTGGTTC	965	0.0	28.34289	4
TGGTTCA	975	0.0	28.052195	5
GGCTCTA	45	0.009548996	26.433983	26-27
ACAACGG	90	0.009553783	26.429983	8