EGAF00004918937 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004918937
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2891657
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21326	0.737501024499102	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10497	0.36300985905313116	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10343	0.3576841928347657	No Hit
TGAAATACAGAGAAAAAGGCATCCCAAAAAAAAAAAAAAAAAAAAAAAAA	6832	0.23626591950566753	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5023	0.173706632563959	No Hit
TCATAAAAAGGTCAATCCAACCACCCAAAAAAAAAAAAAAAAAAAAAAAA	4033	0.1394702068744668	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	7995	79.294685	1
GTATCAA	16750	78.702065	1
AAAGGTC	2125	57.254585	7
TATCAAC	23305	56.625355	2
GAAATAC	3865	55.509117	2
ATCAACG	23910	55.010937	3
CAACGCA	23950	54.647575	5
TCAACGC	24330	54.061302	4
AACGCAG	26075	50.470127	6
TACAGAG	3945	50.366825	6
ACGCAGA	26685	49.073612	7
CGCAGAG	26840	48.84386	8
AATACAG	4430	45.99099	4
GCAGAGT	28535	45.942497	9
TGAAATA	5160	42.131733	1
ATACAGA	5085	40.34934	5
AGGTCAA	3130	39.790947	9
CAGAGAA	5010	38.79793	8
TCATAAA	4165	38.00909	1
ACAGAGA	5245	37.745895	7