FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004918959

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004918959
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7367222
Sequences flagged as poor quality0
Sequence length125
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT159490.21648594273390975No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT116790.15852651107839563No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT78400.10641731713799314No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)