EGAF00004919001 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004919001
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4309465
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21060	0.4886917517603694	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15422	0.3578634470868194	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11729	0.27216835500462355	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	8194	0.19013961129745802	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	7081	0.16431273951639008	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	6158	0.14289476767997883	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	5632	0.13068907625424503	No Hit
ATTCTATACCAACACCTATTCTGATTTTTCGGTCACCCTGAAGTTTATAT	5434	0.1260945384171817	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	5432	0.12604812894408007	No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	5300	0.1229851037193712	No Hit
ATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGC	4725	0.10964238020264695	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4611	0.10699704023585295	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATACATG	1860	60.757465	1
ATATACG	1510	56.327187	1
ATACGAC	1610	52.09035	3
GGTATCA	16460	50.227776	1
TATACGA	1695	50.179382	2
GTATCAA	30340	44.42253	1
GACACTC	1995	42.335964	7
GATCTAC	1510	40.177433	1
TATCAAC	40940	37.13402	2
ATCAACG	41215	37.103153	3
TACGACA	2305	36.900234	4
ATATCAA	4925	36.834312	1
TCAACGC	42090	36.374214	4
CAACGCA	42550	36.07883	5
ACGACAC	2415	35.46577	5
AACGCAG	44255	34.68883	6
ACGATAT	735	33.988033	8
CGACACT	2690	31.176752	6
AGTATCA	4285	30.814926	1
ACGCAGA	51175	29.99813	7