FastQCFastQC Report
Fri 1 Jul 2022
EGAF00004919226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004919226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44494020
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1294480.29093347825168414No Hit
GCCCAGGAGAGGGCAGCTCTGAACTGCTGGCTGGGACCAGCTCAGTAGGA1025270.23042871828618766No Hit
CAGTAAAAGTGGTGGGCATCCCTGGGTGCCAGACCTGCCGCTACCTCCTG795960.1788914555259336No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA708460.15922589147934935No Hit
GAGGTGGAGGGAGGGATGGCAAGCAGAGGAGGGGAGGCAGCTGCCCAGGA694870.15617154844628559No Hit
GCTCTGAACTGCTGGCTGGGACCAGCTCAGTAGGAACAGATGAAAGGAAG642540.14441041739991128No Hit
GTCTATCTCAGTGCCAGATATGGTGGACAAAAACCTTACGTGTCCTGAGG594190.13354378858102728No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC590210.13264928635353693No Hit
CGGGTACACAGGGCCACGCAGTGACCACCGCGGGACCAGGGCTGGTGAGC585810.13166038941862301No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT584280.13131652298443702No Hit
CTTCTATTTGGGGCAGTTTCTGCTCTTCATCTAAGGTCTGAGACTTCCAC559720.12579668009319006No Hit
CTTTATTATTCTGCAGGTACATGTCCAGGGGCCCAGCCTCTGGGCCCAGT483050.10856515100231448No Hit
GTCCAGGGGCCCAGCCTCTGGGCCCAGTAACTCAGCTACTCTTTGTGGCT482580.10845951882972138No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC468330.10525684125642053No Hit
GCTCAGTAGGAACAGATGAAAGGAAGTCTTCTGAGGCAGTGGGCTCGACG467490.1050680518415733No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA464940.10449494111793001No Hit
GGGCCACGCAGTGACCACCGCGGGACCAGGGCTGGTGAGCAGCCCAGTAC461070.10362516131381251No Hit
GCCTGAGGATGAGGAGACACCAGAGCAGGAGATGGAGGAGACCCCTTGCA459850.10335096716367728No Hit
GGATAAAGCCAAGATGAAACTCCCCTTACTTCTGGCTCTTCTATTTGGGG459250.10321611758164356No Hit
ACACAGGGCCACGCAGTGACCACCGCGGGACCAGGGCTGGTGAGCAGCCC458810.10311722788815215No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT458270.10299586326432181No Hit
GATCTAAAGACCCAGGAAGGTCTCTGGGTGGGATAAAGCCAAGATGAAAC454330.10211035100896705No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)