EGAF00004919252 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004919252
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4188861
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12766	0.3047606497327078	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACG	8540	0.20387403640273571	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7360	0.17570408757893854	No Hit
GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAA	6757	0.16130876627321844	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5779	0.1379611307226475	No Hit
TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTGATACCAC	5400	0.12891332512585163	No Hit
GTGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGG	4610	0.11005378311669926	No Hit
CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTGATACC	4238	0.10117308738580727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	38880	44.296898	1
CAACGCA	51390	33.761143	5
TATCAAC	51500	33.675453	2
ATCAACG	51745	33.321625	3
TCAACGC	52380	32.916885	4
AACGCAG	54690	31.644632	6
CGCAGAG	54990	31.356043	8
ACGCAGA	55470	31.18854	7
ATTTAGG	2330	30.629406	1
GCAGAGT	56320	30.423822	9
TAAGACT	1985	30.103502	9
ACTGTGC	2100	29.483469	8
GTACATG	2280	29.384708	1
GGTATCA	30605	29.029253	1
TACATGC	2375	27.887405	2
GTGGGTA	3130	24.611547	8
ATGCTAA	2555	24.231833	5
TACTGTG	1650	23.998175	7
TATGGTG	3245	23.516348	4
TACTAGA	735	22.788141	1