EGAF00004919253 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004919253
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7409590
Sequences flagged as poor quality	0
Sequence length	150
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	38547	0.5202312138728323	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23154	0.31248692572733444	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18627	0.2513904278104456	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14518	0.19593526767338001	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9434	0.12732148472452592	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9060	0.12227397197415782	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT	7686	0.10373043582708355	No Hit
CCATTTGATGATGATTCCATTCAATGATTCCATTCGATTCTATTCGAAAA	7638	0.10308262670404165	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	16310	0.0	69.81879	1
CAACGCA	17500	0.0	63.72222	5
ATCAACG	18080	0.0	61.84565	3
AACGCAG	18030	0.0	61.809143	6
TCAACGC	18280	0.0	61.207565	4
GGTATCA	6820	0.0	60.289257	1
CGCAGAG	19420	0.0	57.384727	8
ACGCAGA	19540	0.0	57.03231	7
TATCAAC	22175	0.0	50.84687	2
GCAGAGT	23245	0.0	48.034893	9
GTCTCGC	1025	0.0	42.67491	1
CCCTCCG	1695	0.0	39.92388	8
TCTGTCG	1280	0.0	37.682472	8
CGCTCTG	1185	0.0	34.021008	5
CTCGCTC	1170	0.0	33.846436	3
CTGCGCG	110	2.540698E-4	32.72291	9
GAGTACG	11045	0.0	32.078625	1
CGCCAGC	840	0.0	31.710054	7
TCTCGCT	1415	0.0	31.547968	2
AGTACGG	11515	0.0	31.201302	2