FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004919942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004919942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2757071
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGTGTACTGCTCCTTCACTACTTAATTGTGCTGTTGAGTATCGCTAGC49200.1784502466566875No Hit
CTATTAATCATTACCCCATGTCCCCAAACCAACGAAATAGACGTGGAGTC49010.1777611095252897No Hit
GTATCTGATCGTCTTCGATCCCTTAACTTTCGTTCTTGATCAATGAAAAC48020.17417034236695392No Hit
GATTAATAGAGACAGTTGGGGCTGTTCGTATTTAATTGTCAGAGGTGAAA44510.16143944062376342No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT42440.1539314729290613No Hit
GGATAATGGAATAGGACTCCACGTCTATTTCGTTGGTTTGGGGACATGGG39620.14370322708410482No Hit
CTACTGCACATCGTTTACTTTGAATAAATTAGAGTGTTTAAAGCAGGCAT37430.13576001488536205No Hit
GGGTAATGATTAATAGAGACAGTTGGGGCTGTTCGTATTTAATTGTCAGA36300.1316614624723121No Hit
GTTTAAAGCAGGCATGCGTAGCCTTGAATACATTAGCATGGGATAATGGA35070.1272002063058949No Hit
GAATAGGACTCCACGTCTATTTCGTTGGTTTGGGGACATGGGGTAATGAT34140.12382706139957948No Hit
TTCTTGATCAATGAAAACATCCTTGCTGAATGCTTTCGCAGAAGTTCGTC31260.11338119330260264No Hit
GTCATATGCTTGTCTTAAAGATTAAGCCATGCATGTCTAAGTATAAGCGA31010.11247443391918452No Hit
GTGTTGTATCTAATAAATGCAACCCTTCCGTGAAGTCAGGCATTTCAGCA30030.10891993713618546No Hit
GTCCTATTCCATTATCCCATGCTAATGTATTCAAGGCTACGCATGCCTGC29630.10746912212271646No Hit
GTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGCAAGGTACAATCAA29500.10699760724333902No Hit
GCCCCAACTGTCTCTATTAATCATTACCCCATGTCCCCAAACCAACGAAA28820.10453122172044173No Hit
CCCTTAACTTTCGTTCTTGATCAATGAAAACATCCTTGCTGAATGCTTTC28410.103044136331636No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)