EGAF00004920182 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004920182
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14730474
Sequences flagged as poor quality	0
Sequence length	150
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	47607	0.32318715609558796	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT	30082	0.2042161032971512	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22798	0.1547675926789593	No Hit
ATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	22106	0.1500698483972749	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATATAG	19169	0.13013158979134004	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	17672	0.11996898402590439	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	16989	0.11533233757447317	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATAT	16302	0.11066853653181832	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16150	0.10963666206532119	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	32380	75.28108	1
GGTATCA	12175	65.096146	1
TCAACGC	38220	63.69137	4
ATCAACG	38200	63.517387	3
CAACGCA	39020	63.401253	5
AACGCAG	39760	61.877186	6
CGCAGAG	40830	60.092834	8
ACGCAGA	41335	59.445145	7
GCAGAGT	44740	54.052406	9
TATCAAC	51370	47.2516	2
GTCTCGC	2330	37.828712	1
CTCGCTC	2745	30.68807	3
GAGTACG	36000	30.463999	1
AGTACGG	38090	28.75316	2
CAGAGTA	50175	26.645603	9
CGCTCTG	3010	26.07306	5
GGGTTAG	20485	26.007214	7
TACGGGT	5970	25.32626	4
GTACATG	13695	25.163671	1
GTACGGG	43930	24.502254	3