FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004920191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004920191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4711831
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTTGATGATGATTCCATTCAATGATTCCATTCGATTCTATTCGAAAA132050.28025198696642556No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT74800.15874932696015626No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT69230.1469280201263585No Hit
CCATTTGATGATGATTCCATTCAATGATTCCATTCGATTCTATTCCAAAA58480.12411311016884943No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT55370.11751270366021194No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)