EGAF00004920218 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004920218
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7479708
Sequences flagged as poor quality	0
Sequence length	150
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	46297	0.6189680131898196	No Hit
TCTTTATCACCAGAATGAGGAACTCCTGGAAGTTAACTGCACCATCAGTG	39311	0.5255686451931012	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	27103	0.3623537175515408	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	25098	0.3355478582853769	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	18164	0.24284370459381568	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	17607	0.2353968898251108	No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	14315	0.19138447650630214	No Hit
CCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAG	12329	0.16483263785163807	No Hit
GTACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATT	11245	0.15034009349028066	No Hit
CTATTAACCTACTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCCTGA	10349	0.13836101623218447	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	10191	0.13624863430497555	No Hit
ACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATTTG	9798	0.13099441849869006	No Hit
GTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGA	9725	0.13001844457029607	No Hit
GTGTATGAACATGAGGATGTTTTCTCGTGTGAATGAGGGTTTTATGTTGT	9204	0.12305293201285397	No Hit
CTTATACACATCTGACGCTGCCGACGACTCCTTACGTGTAGATCTCGGTG	8863	0.11849393051172585	No Hit
TCTATAGGGTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATAT	8215	0.10983049070899559	No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT	7925	0.10595333400715642	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACCAGA	8450	72.08549	8
ACCAGAA	9995	61.08678	9
CGGGACA	1460	58.682415	4
CTTTATC	10700	58.46913	2
GTACATG	8800	58.378246	1
TACATGC	8755	56.574787	2
TTATCAC	11160	56.449192	4
CATGCTA	8825	56.210617	4
ACGGGAC	2305	55.285763	3
TTTATCA	11725	53.05323	3
TCAACGC	11225	51.76081	4
ATCAACG	11405	50.94355	3
CAACGCA	11535	50.870102	5
CGCAGAG	11545	50.26611	8
AACGCAG	11565	50.179184	6
TAAGACT	9920	50.08084	9
GTATCAA	12245	49.80211	1
CGGGGAC	1030	49.62894	4
ACATGCT	10200	48.27996	3
ACGCAGA	12130	47.723186	7