EGAF00004920646 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004920646
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7100559
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27362	0.3853499421665252	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17472	0.24606513374510375	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	16357	0.23036214472691516	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12705	0.17892957441801413	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10011	0.14098889960635494	No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	9900	0.13942564240364735	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	9893	0.13932705861608924	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	9463	0.13327119738037527	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9042	0.1273420867286646	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	8316	0.1171175396190638	No Hit
GTACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATT	7524	0.10596348822677201	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7158	0.10080896447730384	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	13030	77.2251	1
ATCAACG	14775	68.07585	3
TCAACGC	14895	67.86577	4
CAACGCA	15505	66.17187	5
GGTATCA	4935	63.23366	1
AACGCAG	16150	63.127853	6
CGCAGAG	17955	56.737965	8
ACGCAGA	18270	55.798347	7
GCAGAGT	18690	54.005936	9
TATCAAC	23085	43.947983	2
GTCTCGC	1100	29.55096	1
GAGTACG	11720	29.276407	1
TACGGGT	1210	27.966406	4
GTACGGG	14580	27.546667	1
AGTACGG	12985	26.505974	2
AATGCGT	2130	25.690008	6
GTACTTT	14960	25.591516	1
ACGGGAC	1520	25.578455	3
TATACCG	2355	25.375668	6
GGGTTAG	11100	25.36007	7