EGAF00004920854 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004920854
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13011115
Sequences flagged as poor quality	0
Sequence length	150
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT	41878	0.321863268443942	No Hit
ATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	32465	0.2495174318265575	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATATAG	27117	0.2084141136251582	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27056	0.2079452837055087	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATAT	25038	0.19243546767513778	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	23518	0.1807531483658395	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17784	0.13668313591878942	No Hit
GTTATTTCTAGTTAATTCATTATGCAGAAGGTATAGGGGTTAGTCCTTGC	13235	0.10172072109115937	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13159	0.10113660512569445	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	17600	61.647453	4
CAACGCA	18010	61.08565	5
ATCAACG	17975	60.321293	3
AACGCAG	18530	58.788597	6
GTATCAA	19215	57.94287	1
CGCAGAG	19060	56.84882	8
ACGCAGA	19825	54.945477	7
GCAGAGT	23025	46.027004	9
TATCAAC	28225	39.26051	2
GGTATCA	9305	38.43497	1
GAGTACG	14835	33.70205	1
GGGTTAG	21205	32.492256	7
ATAGGGG	21420	32.099514	3
TCTGTCG	3010	31.572962	8
GGGGTTA	22020	31.520226	6
GTACGGG	18825	31.24116	1
TAGGGGT	21945	31.134737	4
CTCGCTC	1905	30.612907	3
ACGGGAC	1725	30.468306	3
AGTACGG	16675	30.096653	2