EGAF00004921063 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004921063
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5405643
Sequences flagged as poor quality	0
Sequence length	150
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	29875	0.552663207688706	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20567	0.3804727763191169	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	14505	0.2683307055238387	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	12278	0.22713301636826552	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	11561	0.2138690993837366	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11559	0.2138321010100001	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8844	0.16360680866272523	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	8785	0.162515356637499	No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	8658	0.16016595990523236	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8215	0.15197082012260152	No Hit
ATTCTATACCAACACCTATTCTGATTTTTCGGTCACCCTGAAGTTTATAT	6557	0.12129916829505759	No Hit
TTGCTATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTA	6101	0.11286353908313959	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5559	0.10283697980055287	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	9530	65.08984	1
CAACGCA	10205	59.190544	5
ATCAACG	10400	58.011494	3
TCAACGC	10430	57.913666	4
AACGCAG	10475	57.871056	6
ACGCAGA	11585	52.264084	7
CGCAGAG	11575	52.24655	8
GGTATCA	4730	49.522522	1
ATAGGGG	9770	49.298637	3
TAGGGGT	9745	49.129593	4
AGGGGTT	10455	45.86206	5
GGGGTTA	11635	45.851673	6
GGGTTAG	11485	45.76097	7
GCAGAGT	13445	44.92628	9
TATCAAC	14990	41.499573	2
ACCTTAG	5760	39.035233	1
GGTTAGT	13405	38.93772	8
CCTTAGC	5805	38.57355	2
TATAGGG	13585	38.265644	2
GAGTACG	5590	37.89437	1