FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004921093

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004921093
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946219
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90200.9532676896151948No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT57050.6029259611147102No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT51830.5477590283010593No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40590.4289704603268376No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT29420.31092167880797156No Hit
GACCTAGGACGGTCAACTTGGTCCCTCCGCCGAAAACCACGGCACTCAGG25610.2706561588807665No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC25310.2674856455006716No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT23790.2514217110415242No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT16690.176386227712612No Hit
GCCTTGGGCTGACCTAGGACGGTCAACTTGGTCCCTCCGCCGAAAACCAC14030.14827434240910403No Hit
CTCCTGTACTGGGAGCACCTCCAACATCGGGGCAGGTTATGATGTACACT12820.13548660510938798No Hit
GATGTACACTGGTACCAGCAACTTCCAGGAACAGCCCCCAAACTCCTCAT11570.12227613269232598No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC11410.12058519222294203No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA11170.11804878151886614No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCC10720.11329301144872381No Hit
ACCTAGGACGGTCAACTTGGTCCCTCCGCCGAAAACCACGGCACTCAGGT10400.10991113050995593No Hit
GTCTGGGGCTGAGGTGCAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCA10330.10917134405460047No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG10300.10885429271659099No Hit
GTGTACATCATAACCTGCCCCGATGTTGGAGGTGCTCCCAGTACAGGAGA10160.10737471980588004No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)