EGAF00004921166 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004921166
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4468719
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11019	0.24658073152507465	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5870	0.1313575545922668	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	5496	0.12298826576475272	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5303	0.11866935468531363	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	5264	0.11779662135838033	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	5175	0.11580499915076334	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	4592	0.10275875480199134	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	4528	0.1013265770347162	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	22725	70.89272	1
GGTATCA	13760	54.81071	1
CAACGCA	33360	48.7087	5
ATCAACG	34635	46.812206	3
TATCAAC	34795	46.513138	2
CGCAGAG	34745	46.47803	8
AACGCAG	35275	46.37004	6
ACGCAGA	35270	45.991352	7
TCAACGC	35705	45.40884	4
GCAGAGT	35555	45.216694	9
TAAGACT	2630	35.040073	9
ATTTAGG	3005	31.49365	1
TGGGTAG	2625	29.072832	9
GTGTATG	5105	27.95017	1
GTACATG	3705	27.508312	1
ATGCTAA	3450	27.12847	5
TACATGC	3560	26.492167	2
TACTGAT	2735	26.324682	7
TTCTCTG	2055	25.575937	7
CAGAGTA	35325	24.579662	9