EGAF00004922225 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004922225
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4634024
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTCCTGTACTGTGTCAAATCGTTAAGAGCGAAGGAGGGACGCAGGAGGTG	19320	0.4169162697474161	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18416	0.3974083863182409	No Hit
GTACAGGAATCTCTACCTGTTATCCATCGACTACGCCTCTCGGCCTCGCC	13218	0.28523805660048374	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6554	0.14143215486151992	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6288	0.13569200332151926	No Hit
CCTCTTCACAACTCGTGTTGCTGGTTAGAAGCATTTGACTCTTAACCGCA	5632	0.12153584012512668	No Hit
GTATCAACGCAGAGTACGGGTATGTCATCTCTGGCTAGAAGCTTTTCTTG	5597	0.12078055702775817	No Hit
CCTTAGTGTTCTCCACTCGACTACCTGTGTCGGTTTGCGGTACGGGTATG	4921	0.10619280349001214	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	26810	75.03527	1
GGTATCA	8640	67.628746	1
CTATCAA	5410	60.798756	1
TATCAAC	39845	59.644627	2
ATCAACG	42060	56.356163	3
TCAACGC	43415	54.894627	4
CAACGCA	43465	54.792732	5
AACGCAG	44045	54.083946	6
ACGCAGA	45970	51.794754	7
CGCAGAG	46375	51.427147	8
CTACGGG	1840	50.638935	1
CAGTACG	695	50.072723	1
GCAGAGT	48695	48.88476	9
CGTATCA	920	45.75807	1
AGAGTAC	48465	34.41995	10-11
GTACTGT	8225	32.619823	6
TGTACTG	8330	31.804356	5
TCTGTCG	1235	31.35969	8
TACAGGA	9205	31.220545	2
TACTGTG	8755	31.0939	7