EGAF00004922278 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004922278
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4809671
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18934	0.393665180009194	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9704	0.20176016197365684	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9087	0.1889318416997753	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	6573	0.13666215423050768	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	6377	0.13258703142065226	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	5708	0.11867755611558461	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	5222	0.10857291486257584	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	36335	57.83833	1
AAAGGTC	1950	48.732098	7
ACAGAGA	3315	45.38774	7
TAAAAAG	2275	44.935726	4
CAACGCA	48685	42.601402	5
CAGAGAA	3490	42.28674	8
ATCAACG	50920	40.774784	3
TATCAAC	51395	40.66619	2
TCAACGC	51140	40.62753	4
AACGCAG	51815	40.13912	6
TAAGACT	2830	39.429478	9
ACGCAGA	52655	39.416748	7
CGCAGAG	52705	39.379353	8
GGTATCA	25105	37.98952	1
GCAGAGT	54830	37.87942	9
TCATAAA	3500	36.693832	1
AATACAG	4560	36.153927	4
AGAGAAA	4180	35.650845	9
GAAATAC	5070	35.2169	2
TGAAATA	5640	32.086403	1