EGAF00004922281 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004922281
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4067253
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16530	0.406416812526784	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8754	0.2152312629679049	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7700	0.18931696651277902	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	7234	0.17785960204590173	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	6754	0.1660580249126376	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	6204	0.15253538444743908	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	6167	0.15162567954341666	No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTAT	5017	0.12335106766163796	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	4967	0.12212173671025629	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4477	0.11007429338671579	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC	4254	0.10459147734355351	No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC	4164	0.10237868163106648	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	24730	70.04721	1
GGTATCA	15085	53.408813	1
CAACGCA	36040	47.76169	5
TATCAAC	36605	47.420166	2
ATCAACG	37625	45.751354	3
AACGCAG	37920	45.583607	6
ACGCAGA	38300	44.98263	7
CGCAGAG	38110	44.97854	8
TCAACGC	38480	44.902073	4
GCAGAGT	39415	43.105766	9
TCTCTGC	1990	33.644554	8
ATTTAGG	3710	32.98667	1
TTTAGGG	4205	29.448875	2
ACTGTGC	2685	29.225847	8
TTCTCTG	2465	28.622663	7
ATTCTCT	2495	27.700369	6
CTATTGA	4570	27.095497	9
TAGGCAT	2755	26.654066	5
CCTCAGG	1190	26.015234	2
TATTCTC	2830	25.947683	5