FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004922337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004922337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5398986
Sequences flagged as poor quality0
Sequence length125
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA61910.1146696805659433No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN55110.10207472292019279No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)