EGAF00004922475 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004922475
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11512672
Sequences flagged as poor quality	0
Sequence length	150
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT	63684	0.5531643740045752	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	36133	0.313854160007338	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATATAG	31874	0.276860141590067	No Hit
ATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	30117	0.26159869750480164	No Hit
CCATTTGATGATGATTCCATTCAATGATTCCATTCGATTCTATTCGAAAA	29031	0.25216561368203666	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATAT	25586	0.22224206509140537	No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA	16971	0.14741147841265692	No Hit
CCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAG	16336	0.1418958170614085	No Hit
GTCCAAGATAGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT	14661	0.127346631607328	No Hit
CTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCT	13910	0.12082338487537905	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	13727	0.11923383207651533	No Hit
TTGCTATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTA	13623	0.11833047966623213	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13505	0.1173055221237954	No Hit
ATTGTAGATATTGGGCTGTTAATTGTCAGTTCAGTGTTTTAATCTGACGC	11611	0.1008540849595993	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAACGCA	11700	57.46868	5
AACGCAG	12285	54.849514	6
CGGGACA	940	53.61539	4
CGCAGAG	12655	53.302742	8
TCAACGC	13145	51.43092	4
ACGCAGA	13115	51.378296	7
ATCAACG	13990	48.32637	3
CGGGGAC	720	46.99857	4
ACGGGAC	1520	44.526703	3
GTATCAA	16630	43.71027	1
TAGGGGT	23020	43.28626	4
ATAGGGG	23470	42.979496	3
GGGTTAG	23835	42.919144	7
GGGGTTA	23985	42.710762	6
AGGGGTT	23910	41.51977	5
ACCTTAG	14825	41.212593	1
GCAGAGT	16550	40.845078	9
CCTTAGC	14720	40.50053	2
GCCAAAC	15325	38.1911	7
GTACGGG	13175	36.246933	1