EGAF00004922476 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004922476
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11512672
Sequences flagged as poor quality	0
Sequence length	150
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT	60123	0.5222332400332433	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	34279	0.2977501660778662	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATATAG	29006	0.2519484616603339	No Hit
ATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	26188	0.2274710857740062	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATAT	25627	0.22259819440699777	No Hit
CCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAG	15896	0.13807394147944108	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	12720	0.11048694864233082	No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA	12367	0.10742076209588879	No Hit
GTCCAAGATAGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT	11719	0.10179218169335494	No Hit

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAACGCA	11030	51.765263	5
AACGCAG	11075	50.839348	6
CGCAGAG	11135	50.36858	8
TCAACGC	11485	49.08629	4
CGGGACA	1240	47.612568	4
ACGCAGA	11950	46.992428	7
ATCAACG	12380	45.82843	3
ACGGGAC	1700	43.62322	3
GTATCAA	14770	42.446533	1
ACCTTAG	15685	39.509888	1
TAGGGGT	24365	39.213352	4
ATAGGGG	24520	39.11229	3
GGGGTTA	25295	39.053177	6
GGGTTAG	25270	38.83218	7
AGGGGTT	24675	38.400726	5
CCTTAGC	15915	38.276215	2
GCAGAGT	14655	37.1892	9
GCCAAAC	16930	36.01866	7
CTTAGCC	17455	35.06134	3
GAGTACG	10690	34.255733	1