EGAF00004922609 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004922609
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6083969
Sequences flagged as poor quality	0
Sequence length	150
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43222	0.710424395653561	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25261	0.4152059288928001	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21691	0.35652712891863847	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14430	0.2371806956938801	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	11296	0.1856682701703444	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	10018	0.16466224597791343	No Hit
ATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGTAGG	9925	0.16313363858362853	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	9053	0.14880088968237676	No Hit
TTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGTA	8610	0.14151945876121327	No Hit
GGTTTATACTTCAATATAAGCCTTGGTAGGGATAGATAGCCACCTATATA	8467	0.13916901943451718	No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTAT	8342	0.1371144396034891	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	7788	0.1280085417923727	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC	7582	0.12462259423083846	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	7049	0.11586186583133477	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7035	0.11563175289025962	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6409	0.10534241709647107	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8755	87.773315	1
GTATCAA	19085	73.11859	1
ATCAACG	22910	59.71974	3
TCAACGC	22900	59.71438	4
CAACGCA	22865	59.3788	5
AACGCAG	23565	57.73714	6
TATCAAC	25190	54.82894	2
ACGCAGA	25960	52.355003	7
CGCAGAG	26315	51.676067	8
GACCGTT	920	47.731262	7
GCAGAGT	29965	45.429516	9
GTACTGG	5290	39.141792	1
GGACCGT	1660	37.72872	6
GCGTACA	2580	30.7017	2
TACGGGT	1755	30.362953	4
GGTTCAC	4405	29.906532	6
AGGACCG	1690	29.817568	5
AGCGTAC	2700	29.703455	1
GAGTACG	13160	29.08583	1
TACACGG	2920	28.351492	5