Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004922798 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10732144 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GACCTAG | 2850 | 0.0 | 22.83158 | 5 |
ACCTAGC | 3070 | 0.0 | 20.886015 | 6 |
TGACCTA | 3325 | 0.0 | 20.569847 | 4 |
TAGCAGT | 4660 | 0.0 | 14.269288 | 9 |
TGTTACG | 2440 | 0.0 | 13.139481 | 58-59 |
CTAGCAG | 5615 | 0.0 | 13.111191 | 8 |
CGACCTA | 615 | 1.0986696E-9 | 12.356773 | 4 |
TACGGTC | 2595 | 0.0 | 12.171794 | 60-61 |
CCTAGCA | 6400 | 0.0 | 11.354595 | 7 |
CGTATCG | 1025 | 0.0 | 11.121097 | 3 |
CTCTGAC | 8775 | 0.0 | 10.899411 | 1 |
GTTACGG | 3180 | 0.0 | 10.75399 | 58-59 |
CCCGTAT | 1575 | 0.0 | 10.574055 | 1 |
CGATCGG | 1080 | 0.0 | 10.554744 | 9 |
TCGGATT | 1905 | 0.0 | 10.471636 | 2 |
CTCCCGT | 3620 | 0.0 | 10.38419 | 1 |
CTCGCGT | 975 | 1.4551915E-11 | 10.2487 | 1 |
TCTGACC | 7505 | 0.0 | 10.125804 | 2 |
CGATTGG | 990 | 2.0008883E-11 | 10.074983 | 4 |
CTCAGAT | 9320 | 0.0 | 10.057833 | 1 |