FastQCFastQC Report
Wed 8 May 2024
EGAF00004922928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004922928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8094070
Total Bases817.5 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT159460.19700842715716566No Hit
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC93110.11503483414400913No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)