FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004923090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004923090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3703764
Sequences flagged as poor quality0
Sequence length125
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAAC51250.1383727472916741No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA50630.13669877454395044No Hit
TCGTGAGACAGTTCGGTCCCTATCTGCCGTGGACGTTTGAGATTTGAGAG49390.1333508290485031No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)