EGAF00004923227 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004923227
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4608687
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28292	0.6138841713485857	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14627	0.31737889772076083	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12722	0.27604391445980164	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	7095	0.1539484022238872	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6986	0.1515833034441263	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	6636	0.14398894956416003	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	5630	0.12216060669774276	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	5492	0.11916626145364179	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	5471	0.11871060022084381	No Hit
TGAAATACAGAGAAAAAGGCATCCCAAAAAAAAAAAAAAAAAAAAAAAAA	4772	0.10354359061485409	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	4622	0.10028886752343998	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	25245	75.27578	1
GGTATCA	13380	60.84586	1
CAACGCA	35130	53.403618	5
ATCAACG	35930	52.380535	3
AACGCAG	37525	50.14866	6
TCAACGC	37810	49.852226	4
TATCAAC	38100	49.851795	2
ACGCAGA	38185	49.16876	7
CGCAGAG	38345	48.94482	8
GCAGAGT	40415	46.509182	9
TAAGACT	3400	38.536026	9
CAGAGAA	3000	37.91493	8
AAAGGTC	1705	37.578556	7
TACAGAG	3215	36.94685	6
ATTTAGG	3395	36.098774	1
GTACATG	3875	35.768837	1
TACATGC	3795	35.478138	2
GAAATAC	4125	31.41807	2
GTCTTAC	465	31.376173	1
ACAGAGA	3650	31.360193	7