EGAF00004923236 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004923236
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4065690
Sequences flagged as poor quality	0
Sequence length	150
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12882	0.3168465869262044	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11587	0.28499467495062336	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT	10632	0.26150542712307134	No Hit
ATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	7506	0.18461810910325185	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATATAG	6732	0.16558075013097406	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	6668	0.16400660158546274	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6216	0.1528891774827889	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAGCCAAGCATAATAT	5758	0.14162417695397336	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5046	0.12411177438515972	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4472	0.1099936296176049	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	7445	64.423485	1
ATCAACG	7835	60.3717	3
TCAACGC	7855	60.30964	4
CAACGCA	8225	58.911785	5
GTCTCGC	870	57.288925	1
AACGCAG	8505	56.379723	6
CGCAGAG	8820	54.1206	8
ACGCAGA	9145	52.51151	7
GGTATCA	3480	51.892143	1
GCAGAGT	10105	46.81145	9
TATCAAC	11470	41.683075	2
CTCGCTC	1155	41.14044	3
TCTGTCG	1305	40.82619	8
CGCTCTG	1160	40.34395	5
TCTCGCT	1285	38.66349	2
GAGTACG	6520	34.45511	1
GTACGGG	8350	33.218925	1
AGTACGG	6885	32.629147	2
TACGGGT	1310	30.77682	4
GGGTTAG	6400	29.811117	7