EGAF00004923407 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004923407
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5149169
Sequences flagged as poor quality	0
Sequence length	150
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	15296	0.2970576417282089	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9163	0.1779510441393553	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	9148	0.17765973499801618	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	8918	0.17319299483081638	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	6563	0.12745745964057503	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	6246	0.12130112645360833	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5559	0.10795916778027678	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	8540	65.60601	1
TCAACGC	9100	59.5735	4
CAACGCA	9165	59.308105	5
ATCAACG	9390	58.116993	3
AACGCAG	9460	57.458645	6
GGTATCA	3910	56.94738	1
CGCAGAG	10515	51.62418	8
ACGCAGA	10955	49.617413	7
GCAGAGT	12490	43.40339	9
ACGGGAC	1755	42.66343	3
TAGGGGT	6000	41.756832	4
GGGTTAG	6455	41.267204	7
TATCAAC	13825	40.36056	2
GAGTACG	8875	40.077126	1
GGGGTTA	7105	39.619797	6
CGGGACT	695	39.363922	4
AGTACGG	9230	38.534157	2
GTACGGG	12420	38.242264	1
CCGCAGT	560	37.437756	1
CATGCTA	4620	37.088097	4