FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004923493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004923493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences969327
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT191381.9743595298593768No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT83280.8591527936392982No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT45920.47373074308257174No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT44970.4639301288419697No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40990.42287071339186877No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT23730.24480902729419485No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG13410.13834340733312908No Hit
CCAAACATGGTGAGGAACATGGTGAAATTGATGGGGCCTGGAGCCTCATT12660.13060608030107487No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT11350.11709154908508687No Hit
GGAACATGGTGAAATTGATGGGGCCTGGAGCCTCATTCATCATGGCATCT11200.11554408367867602No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA10280.10605296251935623No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT9720.1002757583354224No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)