FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20754731
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC434320.20926313137953945No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA350510.168881976836992No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG279910.1348656361771203No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG268210.12922836725756648No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT231100.11134810660759709No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT230360.11099156139388171No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC230140.11088556146547984No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT219960.10598065568761166No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG218250.10515674715321534No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)