FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20047730
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG563690.28117397830078517No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC488640.24373831850289285No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC479160.2390096035810538No Hit
CAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGC465030.23196142406147727No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA326200.16271168855526286No Hit
CAAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGA313550.15640174723023503No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG272950.13615007783923666No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG258830.12910688641556922No Hit
CGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGCTCGCAG247360.12338554040781674No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC222270.11087040777185249No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT215840.10766306210229287No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)