FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23055511
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT625960.27150124757590494No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC379730.1647024869672158No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG377780.16385670220018111No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC291410.12639494305721524No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA282510.12253469463331348No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG269720.11698721403312205No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)