FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18400755
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT259830.1412061624645293No Hit
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG243970.13258695091587275No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG226350.12301125687505757No Hit
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCT203790.11075089038466085No Hit
GCCTACAGCACCCGGTATTCCCAGGCGGTCTCCCATCCAAGTACTAACCA200290.1088487945195727No Hit
GTGATGTTATAAGCCTAAGGCAGCTTGACTTGCAGCAACAAGTTTTTTAC199980.10868032317152204No Hit
GGTAGGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTG195840.10643041549110348No Hit
AGACAGGGTGTTGGCTTTACACCAACGAAAAAGAAAAACAGATGAATAAG192190.10444680123179728No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)