FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23966832
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT839820.3504092656050662No Hit
CGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGG794970.33169590373896723No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG434210.1811712119482458No Hit
CAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGC245790.10255422994578509No Hit
CGAGAACTGTCGCCCTTCCACGATGTGGCTCCGTGCCTTTATCCTGGCCA240940.10053059995580559No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)