FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22394735
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAAGACCAACCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGC400570.17886793480699814No Hit
GACCAACCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGCTCTGG389370.17386675930748902No Hit
CCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGCTCTGGGGACAG267740.11955488644987315No Hit
CAGCTACAGCACAGATCAGCACCATGAAGCTTCTCACGGGCCTGGTTTTC266530.11901458088251547No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA264260.11800094977681137No Hit
CTCAGCTACAGCACAGATCAGCACCATGAAGCTTCTCACGGGCCTGGTTT259010.11565664876141647No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC254660.11371422792008926No Hit
CACAGATCAGCACCATGAAGCTTCTCACGGGCCTGGTTTTCTGCTCCTTG252210.11262022077957164No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA236450.10558285239811947No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)