FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16917635
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT334880.19794728991374974No Hit
GACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACAAGCCC294690.17419101428775358No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA274570.16229809899551562No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT257820.15239718790481055No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT250520.14808216396677193No Hit
GGAGAGACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACA213870.1264183794011397No Hit
GACCAACCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGCTCTGG203170.12009361828648035No Hit
AGGAGAGACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACAC173590.10260890484988003No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)