FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10602210
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC723310.6822256869086728No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG557140.5254942129989879No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT404830.38183548524317096No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT397530.3749501283223026No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA384960.3630941096243142No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCT359990.3395424161566315No Hit
GCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCTC355610.33541120200411045No Hit
CGCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCT333490.314547627334301No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG311450.29375950863074773No Hit
CATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTAT307510.2900433022926352No Hit
CATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCT288020.2716603425134948No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC284740.2685666478969951No Hit
CCAACCTCCTACTCCTCATCGTACCCATTCTAATCGCAATGGCATTCCTA258600.24391141092281704No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT251680.23738446984166509No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC243820.22997092115700407No Hit
CTAAATACTACCGTATGGCCCACCATAATTACCCCCATATTCCTTACACT230060.21699249496095627No Hit
AAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATC221870.20926769041548884No Hit
AATCAACACCCTCCTAGCCTTACTACTAATAATTATTACATTTTGACTAC215180.20295768523732313No Hit
CTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAG214630.20243892546931253No Hit
CCCTAATAAAACTAATTAACCACTCATTCATCGACCTCCCCACCCCATCC206990.19523288069185574No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT206750.19500651279308748No Hit
GCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTC204870.19323329758606933No Hit
ATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGC203280.1917336102567295No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA198380.18711193232354387No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT196950.18576315692671622No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG191130.18027373538158553No Hit
AATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGG174550.1646354863750105No Hit
CTACCGTATGGCCCACCATAATTACCCCCATATTCCTTACACTATTCCTC161940.152741739693894No Hit
CTCCTACTCCTCATCGTACCCATTCTAATCGCAATGGCATTCCTAATGCT153540.14481886323700438No Hit
CTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCGCATGA136310.12856753450459857No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT128730.12141808170183387No Hit
CGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTC128270.12098420989586132No Hit
CAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCA126110.11894689880694687No Hit
GGGCGCGACCCGCTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGC119460.1126746216119092No Hit
AATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCTCCCCA117780.11109004632053128No Hit
TTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTA112910.1064966643746917No Hit
ATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTC111820.10546857683445243No Hit
CTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCGCAT110960.10465742519719945No Hit
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT110550.10427071337013698No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT110290.10402548147980467No Hit
CGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTAGGCCTACCCG106910.1008374669054848No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)