FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18668127
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTTTGTTGCCTTGGGCTTGTGTTTCACAAGCTCAACAAGTGCAGTTT224780.12040843733278651No Hit
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT206380.11055206556072818No Hit
CAAATCTTTAAACCGATGAGCAACCTCACTCTTGTGTGCATCTCGACGAA188240.10083496860718807No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)