FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924865

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924865
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18518847
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT262960.14199588127705792No Hit
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG251400.13575359200278506No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG230360.12439219353127115No Hit
GCCTACAGCACCCGGTATTCCCAGGCGGTCTCCCATCCAAGTACTAACCA208570.1126258022435198No Hit
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCT205560.1110004310743536No Hit
GGTAGGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTG200740.10839767724200107No Hit
GTGATGTTATAAGCCTAAGGCAGCTTGACTTGCAGCAACAAGTTTTTTAC198430.10715029936798981No Hit
AGACAGGGTGTTGGCTTTACACCAACGAAAAAGAAAAACAGATGAATAAG195320.10547092915665862No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)