FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24269190
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAAGACCAACCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGC415880.1713613021283364No Hit
GACCAACCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGCTCTGG387710.15975399261368015No Hit
CTCAGCTACAGCACAGATCAGCACCATGAAGCTTCTCACGGGCCTGGTTT297240.12247627547520128No Hit
CAGCTACAGCACAGATCAGCACCATGAAGCTTCTCACGGGCCTGGTTTTC287110.11830225895466638No Hit
CACAGATCAGCACCATGAAGCTTCTCACGGGCCTGGTTTTCTGCTCCTTG283580.11684773987100518No Hit
CCAAGATGAGTGCCCTGGGAGCTGTCATTGCCCTCCTGCTCTGGGGACAG275210.11339892266696992No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA259340.10685976746648733No Hit
CAGCATTCGGGCCGAGATGTCTCGCTCCGTGGCCTTAGCTGTGCTCGCGC258270.10641887924566086No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)