FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18102444
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACAAGCCC498170.2751948852873126No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA424990.23476940461740967No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC410170.22658266474957747No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG370930.20490603368252375No Hit
GTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGT293420.16208861079752546No Hit
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT280830.15513374879104724No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA272130.1503277678969757No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT270650.1495101987333865No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC259620.14341709881825904No Hit
GGAGAGACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACA259550.14337843000646763No Hit
CTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTGGAGCCGGGCGTGGAA254570.14062742025330943No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA234490.1295349953851535No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG232060.1281926352043956No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT213800.11810559944281555No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT211210.1166748534065345No Hit
AGGAGAGACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACAC200920.1109905380732016No Hit
TGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAG198900.10987466664722177No Hit
CAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACAAGCCCAAGGCAA196210.10838867945123873No Hit
CAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTGGAGCCGGGCGT183520.10137857628505853No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)