FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004924998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004924998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16176736
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1145360.7080291104460134No Hit
CGCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCT904840.5593464590137343No Hit
CGGTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCG877220.5422725573317139No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA821850.508044391649836No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG591830.3658525428120976No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC581320.35935555850080014No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT485030.2998318078504836No Hit
CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACT465300.2876352806895037No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG451270.278962332079846No Hit
TTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTA450170.2782823432366084No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC420660.2600400970875707No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG415840.25706050961083865No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC385860.23852772277423578No Hit
GGTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGG381900.23607976293858043No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT363910.22495885449326736No Hit
AATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGG362120.2238523271938171No Hit
CATAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTAT321710.19887200977997044No Hit
ACTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACAC300030.18547004785143306No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCT294720.18218755625362248No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT275310.17018884402885726No Hit
AAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATC272040.16816742264941456No Hit
TAAATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATAT263290.1627584204872973No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC261960.16193625215865548No Hit
TGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAG261720.16178789095649457No Hit
CACTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTA254360.15723814742355935No Hit
CATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCT252910.1563417984938371No Hit
CCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCAATGGCATTCCTA252710.156218164158703No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA252390.1560203492224884No Hit
CCCTAATAAAACTAATTAACCACTCATTCATCGACCTCCCCACCCCATCC252080.15582871600303053No Hit
CCGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATAC240830.1488742846517369No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT234670.14506634712960637No Hit
GTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGT228480.1412398644572057No Hit
CTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACTATTCCTC227200.1404486047123474No Hit
ATATTATACTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGC220290.13617703843346396No Hit
CTCCAACACATATGGCCTAGACTACGTACATAACCTAAACCTACTCCAAT208500.12888879437730824No Hit
TGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGC202950.12545794157733672No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCC202870.1254084878432831No Hit
GCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCTC201650.12465431839896503No Hit
CCATAATTACCCCCATACTCCTTACACTATTCCTCATCACCCAACTAAAA182040.11253197183906567No Hit
ACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAA180720.11171598522718056No Hit
CTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTACC177010.10942256831044284No Hit
CGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATT174650.10796368315586036No Hit
TGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCT174090.10761750701748485No Hit
CCCAACTAAAAATATTAAACACAAACTACCACCTACCTCCCTCACCAAAG173970.10754332641640439No Hit
AAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACTAT166850.10314194408563013No Hit
GGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCA166590.1029812194499558No Hit
CCCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAG163310.10095361635375641No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)