FastQCFastQC Report
Wed 1 May 2024
EGAF00004925010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20465312
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA243490.11897693032972086No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG238780.1166754750672748No Hit
CTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGT234960.11480890200940988No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)