FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19986829
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG562590.2814803688969371No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC482550.2414339963583018No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC476070.23819186125022634No Hit
CAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGC463260.23178264045787353No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA329140.16467844899258408No Hit
CAAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGA309790.15499707332263662No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG278080.1391316251317305No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG261710.13094123134790417No Hit
CGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGCTCGCAG247300.12373148336837222No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC224450.11229895447647047No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT219430.10978730042669599No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)