FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925344

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925344
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24689599
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG420620.17036323676216855No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA416990.16889298202048564No Hit
CCTAGAGGCAGCTGCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTACT391180.1584391872869219No Hit
AGGAGGTCCCCCACGGCCCTTCAGGATGAAAGCTGCGGTGCTGACCTTGG385970.15632898695519518No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC363710.14731304465495776No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC315640.1278433076211566No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG312760.12667682452031723No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)