FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19034058
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA450910.23689640958328484No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG356180.18712772652053491No Hit
GTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGT277550.14581756554487751No Hit
GAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG248210.1304030911327474No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC241040.12663615924675653No Hit
CCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTAC233630.12274313759052327No Hit
CATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGC204820.10760711142101176No Hit
CAAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGA192800.10129211542803956No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)