FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17974764
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGG962010.5352003508919505No Hit
AGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAG424570.23620337936008506No Hit
CAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGC415310.23105171227839208No Hit
GGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGC368340.20492063205948072No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC325200.18092031695103203No Hit
CGCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCT324170.18034729134691282No Hit
CAAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGA305370.1698881832328925No Hit
CAAGGATTCAGAGTGCCCCTCCGGCCTCGCCATGAGGCTCTTCCTGTCGC271750.15118418244601153No Hit
CGCTGGCTAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGCTCGCAG231760.1289363242821992No Hit
GACAAATCAAGAAACAAACTGCACTTGTTGAGCTTGTGAAACACAAGCCC222020.12351761614227592No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG213420.1187331305156496No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA210060.11686384310803748No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC201740.1122351314320455No Hit
CCTAGAGGCAGCTGCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTACT198110.11021563342917882No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC190680.10608206038198889No Hit
CAGCATTCGGGCCGAGATGTCTCGCTCCGTGGCCTTAGCTGTGCTCGCGC186870.10396242198228584No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT180970.10068004230820499No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)