FastQCFastQC Report
Mon 8 Aug 2022
EGAF00004925436

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004925436
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21992556
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT403330.18339387199923465No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT257740.1171941997101201No Hit
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT251530.11437051700584507No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA224100.10189811498035972No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)